SHOGUN  v3.2.0
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Defines
Public Member Functions | Static Public Member Functions | Public Attributes | Protected Member Functions | Protected Attributes
CLibSVMFile Class Reference

Detailed Description

read sparse real valued features in svm light format e.g. -1 1:10.0 2:100.2 1000:1.3 with -1 == (optional) label and dim 1 - value 10.0 dim 2 - value 100.2 dim 1000 - value 1.3

Definition at line 30 of file LibSVMFile.h.

Inheritance diagram for CLibSVMFile:
Inheritance graph
[legend]

List of all members.

Public Member Functions

 CLibSVMFile ()
 CLibSVMFile (FILE *f, const char *name=NULL)
 CLibSVMFile (const char *fname, char rw='r', const char *name=NULL)
virtual ~CLibSVMFile ()
virtual const char * get_name () const
void close ()
FILE * get_file_descriptor ()
void set_variable_name (const char *name)
char * get_variable_name ()
virtual CSGObjectshallow_copy () const
virtual CSGObjectdeep_copy () const
virtual bool is_generic (EPrimitiveType *generic) const
template<class T >
void set_generic ()
void unset_generic ()
virtual void print_serializable (const char *prefix="")
virtual bool save_serializable (CSerializableFile *file, const char *prefix="", int32_t param_version=Version::get_version_parameter())
virtual bool load_serializable (CSerializableFile *file, const char *prefix="", int32_t param_version=Version::get_version_parameter())
DynArray< TParameter * > * load_file_parameters (const SGParamInfo *param_info, int32_t file_version, CSerializableFile *file, const char *prefix="")
DynArray< TParameter * > * load_all_file_parameters (int32_t file_version, int32_t current_version, CSerializableFile *file, const char *prefix="")
void map_parameters (DynArray< TParameter * > *param_base, int32_t &base_version, DynArray< const SGParamInfo * > *target_param_infos)
void set_global_io (SGIO *io)
SGIOget_global_io ()
void set_global_parallel (Parallel *parallel)
Parallelget_global_parallel ()
void set_global_version (Version *version)
Versionget_global_version ()
SGStringList< char > get_modelsel_names ()
void print_modsel_params ()
char * get_modsel_param_descr (const char *param_name)
index_t get_modsel_param_index (const char *param_name)
void build_gradient_parameter_dictionary (CMap< TParameter *, CSGObject * > *dict)
virtual bool update_parameter_hash ()
virtual bool equals (CSGObject *other, float64_t accuracy=0.0)
virtual CSGObjectclone ()
Vector Access Functions

vector access functions

Functions to access vectors of one of the several base data types. These functions are used when writing vectors of length len to e.g. a file

virtual void get_vector (int8_t *&vector, int32_t &len)
virtual void get_vector (uint8_t *&vector, int32_t &len)
virtual void get_vector (char *&vector, int32_t &len)
virtual void get_vector (int32_t *&vector, int32_t &len)
virtual void get_vector (uint32_t *&vector, int32_t &len)
virtual void get_vector (float64_t *&vector, int32_t &len)
virtual void get_vector (float32_t *&vector, int32_t &len)
virtual void get_vector (floatmax_t *&vector, int32_t &len)
virtual void get_vector (int16_t *&vector, int32_t &len)
virtual void get_vector (uint16_t *&vector, int32_t &len)
virtual void get_vector (int64_t *&vector, int32_t &len)
virtual void get_vector (uint64_t *&vector, int32_t &len)
virtual void set_vector (const int8_t *vector, int32_t len)
virtual void set_vector (const uint8_t *vector, int32_t len)
virtual void set_vector (const char *vector, int32_t len)
virtual void set_vector (const int32_t *vector, int32_t len)
virtual void set_vector (const uint32_t *vector, int32_t len)
virtual void set_vector (const float32_t *vector, int32_t len)
virtual void set_vector (const float64_t *vector, int32_t len)
virtual void set_vector (const floatmax_t *vector, int32_t len)
virtual void set_vector (const int16_t *vector, int32_t len)
virtual void set_vector (const uint16_t *vector, int32_t len)
virtual void set_vector (const int64_t *vector, int32_t len)
virtual void set_vector (const uint64_t *vector, int32_t len)
Matrix Access Functions

Functions to access matrices of one of the several base data types. These functions are used when writing matrices of num_feat rows and num_vec columns to e.g. a file

virtual void get_matrix (uint8_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (int8_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (char *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (int32_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (uint32_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (int64_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (uint64_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (float32_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (float64_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (floatmax_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (int16_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_matrix (uint16_t *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void set_matrix (const uint8_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const int8_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const char *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const int32_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const uint32_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const int64_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const uint64_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const float32_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const float64_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const floatmax_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const int16_t *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_matrix (const uint16_t *matrix, int32_t num_feat, int32_t num_vec)
N-Dimensional Array Access Functions

Functions to access n-dimensional arrays of one of the several base data types. These functions are used when loading n-dimensional arrays from e.g. file and return the them and its dimensions dims and num_dims by reference

virtual void get_ndarray (uint8_t *&array, int32_t *&dims, int32_t &num_dims)
virtual void get_ndarray (char *&array, int32_t *&dims, int32_t &num_dims)
virtual void get_ndarray (int32_t *&array, int32_t *&dims, int32_t &num_dims)
virtual void get_ndarray (float32_t *&array, int32_t *&dims, int32_t &num_dims)
virtual void get_ndarray (float64_t *&array, int32_t *&dims, int32_t &num_dims)
virtual void get_ndarray (int16_t *&array, int32_t *&dims, int32_t &num_dims)
virtual void get_ndarray (uint16_t *&array, int32_t *&dims, int32_t &num_dims)
Sparse Matrix Access Functions

Functions to access sparse matrices of one of the several base data types. These functions are used when writing sparse matrices of num_feat rows and num_vec columns to e.g. a file

virtual void get_sparse_matrix (SGSparseVector< bool > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< uint8_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< int8_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< char > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< int32_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< uint32_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< int64_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< uint64_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< int16_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< uint16_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< float32_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< float64_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void get_sparse_matrix (SGSparseVector< floatmax_t > *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void set_sparse_matrix (const SGSparseVector< bool > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< uint8_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< int8_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< char > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< int32_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< uint32_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< int64_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< uint64_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< int16_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< uint16_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< float32_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< float64_t > *matrix, int32_t num_feat, int32_t num_vec)
virtual void set_sparse_matrix (const SGSparseVector< floatmax_t > *matrix, int32_t num_feat, int32_t num_vec)
Sparse Matrix Access Functions With Labels

Functions to access sparse matrices of one of the several base data types. These functions are used when writing sparse matrices of num_feat rows and num_vec columns to e.g. a file

virtual void get_sparse_matrix (SGSparseVector< bool > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< uint8_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< int8_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< char > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< int32_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< uint32_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< int64_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< uint64_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< int16_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< uint16_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< float32_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< float64_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void get_sparse_matrix (SGSparseVector< floatmax_t > *&matrix, int32_t &num_feat, int32_t &num_vec, float64_t *&labels, bool load_labels=true)
virtual void set_sparse_matrix (const SGSparseVector< bool > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< uint8_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< int8_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< char > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< int32_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< uint32_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< int64_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< uint64_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< int16_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< uint16_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< float32_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< float64_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
virtual void set_sparse_matrix (const SGSparseVector< floatmax_t > *matrix, int32_t num_feat, int32_t num_vec, const float64_t *labels)
String Access Functions

Functions to access strings of one of the several base data types. These functions are used when writing variable length datatypes like strings to a file. Here num_str denotes the number of strings and strings is a pointer to a string structure.

virtual void get_string_list (SGString< uint8_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< int8_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< char > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< int32_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< uint32_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< int16_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< uint16_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< int64_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< uint64_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< float32_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< float64_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void get_string_list (SGString< floatmax_t > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void set_string_list (const SGString< uint8_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< int8_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< char > *strings, int32_t num_str)
virtual void set_string_list (const SGString< int32_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< uint32_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< int16_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< uint16_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< int64_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< uint64_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< float32_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< float64_t > *strings, int32_t num_str)
virtual void set_string_list (const SGString< floatmax_t > *strings, int32_t num_str)
Vector Access Functions

vector access functions

Functions to access vectors of one of the several base data types. These functions are used when writing vectors of length len to e.g. a file

virtual void get_vector (bool *&vector, int32_t &len)
virtual void set_vector (const bool *vector, int32_t len)
Matrix Access Functions

Functions to access matrices of one of the several base data types. These functions are used when writing matrices of num_feat rows and num_vec columns to e.g. a file

virtual void get_matrix (bool *&matrix, int32_t &num_feat, int32_t &num_vec)
virtual void set_matrix (const bool *matrix, int32_t num_feat, int32_t num_vec)
Sparse Vector Access Functions

Functions to access sparse vectors of one of the several base data types. These functions are used when writing sparse vectors of num_feat entries to e.g. a file

virtual void get_sparse_vector (SGSparseVectorEntry< bool > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< uint8_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< int8_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< char > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< int32_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< uint32_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< int64_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< uint64_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< int16_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< uint16_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< float32_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< float64_t > *&entries, int32_t &num_feat)
virtual void get_sparse_vector (SGSparseVectorEntry< floatmax_t > *&entries, int32_t &num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< bool > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< uint8_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< int8_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< char > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< int32_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< uint32_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< int64_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< uint64_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< int16_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< uint16_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< float32_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< float64_t > *entries, int32_t num_feat)
virtual void set_sparse_vector (const SGSparseVectorEntry< floatmax_t > *entries, int32_t num_feat)
String Access Functions

Functions to access strings of one of the several base data types. These functions are used when writing variable length datatypes like strings to a file. Here num_str denotes the number of strings and strings is a pointer to a string structure.

virtual void get_string_list (SGString< bool > *&strings, int32_t &num_str, int32_t &max_string_len)
virtual void set_string_list (const SGString< bool > *strings, int32_t num_str)

Static Public Member Functions

static char * read_whole_file (char *fname, size_t &len)

Public Attributes

SGIOio
Parallelparallel
Versionversion
Parameterm_parameters
Parameterm_model_selection_parameters
Parameterm_gradient_parameters
ParameterMapm_parameter_map
uint32_t m_hash

Protected Member Functions

virtual TParametermigrate (DynArray< TParameter * > *param_base, const SGParamInfo *target)
virtual void one_to_one_migration_prepare (DynArray< TParameter * > *param_base, const SGParamInfo *target, TParameter *&replacement, TParameter *&to_migrate, char *old_name=NULL)
virtual void load_serializable_pre () throw (ShogunException)
virtual void load_serializable_post () throw (ShogunException)
virtual void save_serializable_pre () throw (ShogunException)
virtual void save_serializable_post () throw (ShogunException)

Protected Attributes

FILE * file
char task
char * filename
char * variable_name

Constructor & Destructor Documentation

default constructor

Definition at line 18 of file LibSVMFile.cpp.

CLibSVMFile ( FILE *  f,
const char *  name = NULL 
)

constructor

Parameters:
falready opened file
namevariable name (e.g. "x" or "/path/to/x")

Definition at line 23 of file LibSVMFile.cpp.

CLibSVMFile ( const char *  fname,
char  rw = 'r',
const char *  name = NULL 
)

constructor

Parameters:
fnamefilename to open
rwmode, 'r' or 'w'
namevariable name (e.g. "x" or "/path/to/x")

Definition at line 30 of file LibSVMFile.cpp.

~CLibSVMFile ( ) [virtual]

destructor

Definition at line 37 of file LibSVMFile.cpp.


Member Function Documentation

void build_gradient_parameter_dictionary ( CMap< TParameter *, CSGObject * > *  dict) [inherited]

Builds a dictionary of all parameters in SGObject as well of those of SGObjects that are parameters of this object. Dictionary maps parameters to the objects that own them.

Parameters:
dictdictionary of parameters to be built.

Definition at line 1156 of file SGObject.cpp.

CSGObject * clone ( ) [virtual, inherited]

Creates a clone of the current object. This is done via recursively traversing all parameters, which corresponds to a deep copy. Calling equals on the cloned object always returns true although none of the memory of both objects overlaps.

Returns:
an identical copy of the given object, which is disjoint in memory. NULL if the clone fails. Note that the returned object is SG_REF'ed

Definition at line 1273 of file SGObject.cpp.

void close ( ) [inherited]

close

Definition at line 67 of file File.h.

virtual CSGObject* deep_copy ( ) const [virtual, inherited]

A deep copy. All the instance variables will also be copied.

Definition at line 126 of file SGObject.h.

bool equals ( CSGObject other,
float64_t  accuracy = 0.0 
) [virtual, inherited]

Recursively compares the current SGObject to another one. Compares all registered numerical parameters, recursion upon complex (SGObject) parameters. Does not compare pointers!

May be overwritten but please do with care! Should not be necessary in most cases.

Parameters:
otherobject to compare with
accuracyaccuracy to use for comparison (optional)
Returns:
true if all parameters were equal, false if not

Definition at line 1177 of file SGObject.cpp.

FILE* get_file_descriptor ( ) [inherited]

get the file descriptor

Returns:
FILE ptr

Definition at line 82 of file File.h.

SGIO * get_global_io ( ) [inherited]

get the io object

Returns:
io object

Definition at line 174 of file SGObject.cpp.

Parallel * get_global_parallel ( ) [inherited]

get the parallel object

Returns:
parallel object

Definition at line 209 of file SGObject.cpp.

Version * get_global_version ( ) [inherited]

get the version object

Returns:
version object

Definition at line 222 of file SGObject.cpp.

virtual void get_matrix ( uint8_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 83 of file LibSVMFile.h.

virtual void get_matrix ( int8_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 85 of file LibSVMFile.h.

virtual void get_matrix ( char *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 87 of file LibSVMFile.h.

virtual void get_matrix ( int32_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 89 of file LibSVMFile.h.

virtual void get_matrix ( uint32_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 91 of file LibSVMFile.h.

virtual void get_matrix ( int64_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 93 of file LibSVMFile.h.

virtual void get_matrix ( uint64_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 95 of file LibSVMFile.h.

virtual void get_matrix ( float32_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 97 of file LibSVMFile.h.

virtual void get_matrix ( float64_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 99 of file LibSVMFile.h.

virtual void get_matrix ( floatmax_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 101 of file LibSVMFile.h.

virtual void get_matrix ( int16_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 103 of file LibSVMFile.h.

virtual void get_matrix ( uint16_t *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

Definition at line 105 of file LibSVMFile.h.

void get_matrix ( bool *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual, inherited]

Definition at line 101 of file File.cpp.

SGStringList< char > get_modelsel_names ( ) [inherited]
Returns:
vector of names of all parameters which are registered for model selection

Definition at line 1060 of file SGObject.cpp.

char * get_modsel_param_descr ( const char *  param_name) [inherited]

Returns description of a given parameter string, if it exists. SG_ERROR otherwise

Parameters:
param_namename of the parameter
Returns:
description of the parameter

Definition at line 1084 of file SGObject.cpp.

index_t get_modsel_param_index ( const char *  param_name) [inherited]

Returns index of model selection parameter with provided index

Parameters:
param_namename of model selection parameter
Returns:
index of model selection parameter with provided name, -1 if there is no such

Definition at line 1097 of file SGObject.cpp.

virtual const char* get_name ( ) const [virtual]
Returns:
object name

Reimplemented from CFile.

Definition at line 438 of file LibSVMFile.h.

virtual void get_ndarray ( uint8_t *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 117 of file LibSVMFile.h.

virtual void get_ndarray ( char *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 119 of file LibSVMFile.h.

virtual void get_ndarray ( int32_t *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 121 of file LibSVMFile.h.

virtual void get_ndarray ( float32_t *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 123 of file LibSVMFile.h.

virtual void get_ndarray ( float64_t *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 125 of file LibSVMFile.h.

virtual void get_ndarray ( int16_t *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 127 of file LibSVMFile.h.

virtual void get_ndarray ( uint16_t *&  array,
int32_t *&  dims,
int32_t &  num_dims 
) [virtual]

Implements CFile.

Definition at line 129 of file LibSVMFile.h.

virtual void get_sparse_matrix ( SGSparseVector< bool > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< uint8_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< int8_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< char > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< int32_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< uint32_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< int64_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< uint64_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< int16_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< uint16_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< float32_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< float64_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< floatmax_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec 
) [virtual]

Implements CFile.

virtual void get_sparse_matrix ( SGSparseVector< bool > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< uint8_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< int8_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< char > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< int32_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< uint32_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< int64_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< uint64_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< int16_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< uint16_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< float32_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< float64_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_matrix ( SGSparseVector< floatmax_t > *&  matrix,
int32_t &  num_feat,
int32_t &  num_vec,
float64_t *&  labels,
bool  load_labels = true 
) [virtual]
virtual void get_sparse_vector ( SGSparseVectorEntry< bool > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< uint8_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< int8_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< char > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< int32_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< uint32_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< int64_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< uint64_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< int16_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< uint16_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< float32_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< float64_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_sparse_vector ( SGSparseVectorEntry< floatmax_t > *&  entries,
int32_t &  num_feat 
) [virtual, inherited]
virtual void get_string_list ( SGString< uint8_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 225 of file LibSVMFile.h.

virtual void get_string_list ( SGString< int8_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 228 of file LibSVMFile.h.

virtual void get_string_list ( SGString< char > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 231 of file LibSVMFile.h.

virtual void get_string_list ( SGString< int32_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 234 of file LibSVMFile.h.

virtual void get_string_list ( SGString< uint32_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 237 of file LibSVMFile.h.

virtual void get_string_list ( SGString< int16_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 240 of file LibSVMFile.h.

virtual void get_string_list ( SGString< uint16_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 243 of file LibSVMFile.h.

virtual void get_string_list ( SGString< int64_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 246 of file LibSVMFile.h.

virtual void get_string_list ( SGString< uint64_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 249 of file LibSVMFile.h.

virtual void get_string_list ( SGString< float32_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 252 of file LibSVMFile.h.

virtual void get_string_list ( SGString< float64_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 255 of file LibSVMFile.h.

virtual void get_string_list ( SGString< floatmax_t > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual]

Implements CFile.

Definition at line 258 of file LibSVMFile.h.

void get_string_list ( SGString< bool > *&  strings,
int32_t &  num_str,
int32_t &  max_string_len 
) [virtual, inherited]

Definition at line 132 of file File.cpp.

char * get_variable_name ( ) [inherited]

get the path to the variable to be accessed

only supported by some file interfaces like CHDF5File

Returns:
name variable path & name

Definition at line 185 of file File.cpp.

virtual void get_vector ( int8_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 61 of file LibSVMFile.h.

virtual void get_vector ( uint8_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 62 of file LibSVMFile.h.

virtual void get_vector ( char *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 63 of file LibSVMFile.h.

virtual void get_vector ( int32_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 64 of file LibSVMFile.h.

virtual void get_vector ( uint32_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 65 of file LibSVMFile.h.

virtual void get_vector ( float64_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 66 of file LibSVMFile.h.

virtual void get_vector ( float32_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 67 of file LibSVMFile.h.

virtual void get_vector ( floatmax_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 68 of file LibSVMFile.h.

virtual void get_vector ( int16_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 69 of file LibSVMFile.h.

virtual void get_vector ( uint16_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 70 of file LibSVMFile.h.

virtual void get_vector ( int64_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 71 of file LibSVMFile.h.

virtual void get_vector ( uint64_t *&  vector,
int32_t &  len 
) [virtual]

Implements CFile.

Definition at line 72 of file LibSVMFile.h.

void get_vector ( bool *&  vector,
int32_t &  len 
) [virtual, inherited]

Definition at line 73 of file File.cpp.

bool is_generic ( EPrimitiveType *  generic) const [virtual, inherited]

If the SGSerializable is a class template then TRUE will be returned and GENERIC is set to the type of the generic.

Parameters:
genericset to the type of the generic if returning TRUE
Returns:
TRUE if a class template.

Definition at line 228 of file SGObject.cpp.

DynArray< TParameter * > * load_all_file_parameters ( int32_t  file_version,
int32_t  current_version,
CSerializableFile file,
const char *  prefix = "" 
) [inherited]

maps all parameters of this instance to the provided file version and loads all parameter data from the file into an array, which is sorted (basically calls load_file_parameter(...) for all parameters and puts all results into a sorted array)

Parameters:
file_versionparameter version of the file
current_versionversion from which mapping begins (you want to use Version::get_version_parameter() for this in most cases)
filefile to load from
prefixprefix for members
Returns:
(sorted) array of created TParameter instances with file data

Definition at line 633 of file SGObject.cpp.

DynArray< TParameter * > * load_file_parameters ( const SGParamInfo param_info,
int32_t  file_version,
CSerializableFile file,
const char *  prefix = "" 
) [inherited]

loads some specified parameters from a file with a specified version The provided parameter info has a version which is recursively mapped until the file parameter version is reached. Note that there may be possibly multiple parameters in the mapping, therefore, a set of TParameter instances is returned

Parameters:
param_infoinformation of parameter
file_versionparameter version of the file, must be <= provided parameter version
filefile to load from
prefixprefix for members
Returns:
new array with TParameter instances with the attached data

Definition at line 474 of file SGObject.cpp.

bool load_serializable ( CSerializableFile file,
const char *  prefix = "",
int32_t  param_version = Version::get_version_parameter() 
) [virtual, inherited]

Load this object from file. If it will fail (returning FALSE) then this object will contain inconsistent data and should not be used!

Parameters:
filewhere to load from
prefixprefix for members
param_version(optional) a parameter version different to (this is mainly for testing, better do not use)
Returns:
TRUE if done, otherwise FALSE

Definition at line 305 of file SGObject.cpp.

void load_serializable_post ( ) throw (ShogunException) [protected, virtual, inherited]

Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_POST is called.

Exceptions:
ShogunExceptionWill be thrown if an error occurres.

Reimplemented in CKernel, CWeightedDegreePositionStringKernel, CList, CAlphabet, CLinearHMM, CGaussianKernel, CInverseMultiQuadricKernel, CCircularKernel, and CExponentialKernel.

Definition at line 989 of file SGObject.cpp.

void load_serializable_pre ( ) throw (ShogunException) [protected, virtual, inherited]

Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::LOAD_SERIALIZABLE_PRE is called.

Exceptions:
ShogunExceptionWill be thrown if an error occurres.

Reimplemented in CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, and CDynamicObjectArray.

Definition at line 984 of file SGObject.cpp.

void map_parameters ( DynArray< TParameter * > *  param_base,
int32_t &  base_version,
DynArray< const SGParamInfo * > *  target_param_infos 
) [inherited]

Takes a set of TParameter instances (base) with a certain version and a set of target parameter infos and recursively maps the base level wise to the current version using CSGObject::migrate(...). The base is replaced. After this call, the base version containing parameters should be of same version/type as the initial target parameter infos. Note for this to work, the migrate methods and all the internal parameter mappings have to match

Parameters:
param_baseset of TParameter instances that are mapped to the provided target parameter infos
base_versionversion of the parameter base
target_param_infosset of SGParamInfo instances that specify the target parameter base

Definition at line 671 of file SGObject.cpp.

TParameter * migrate ( DynArray< TParameter * > *  param_base,
const SGParamInfo target 
) [protected, virtual, inherited]

creates a new TParameter instance, which contains migrated data from the version that is provided. The provided parameter data base is used for migration, this base is a collection of all parameter data of the previous version. Migration is done FROM the data in param_base TO the provided param info Migration is always one version step. Method has to be implemented in subclasses, if no match is found, base method has to be called.

If there is an element in the param_base which equals the target, a copy of the element is returned. This represents the case when nothing has changed and therefore, the migrate method is not overloaded in a subclass

Parameters:
param_baseset of TParameter instances to use for migration
targetparameter info for the resulting TParameter
Returns:
a new TParameter instance with migrated data from the base of the type which is specified by the target parameter

Definition at line 878 of file SGObject.cpp.

void one_to_one_migration_prepare ( DynArray< TParameter * > *  param_base,
const SGParamInfo target,
TParameter *&  replacement,
TParameter *&  to_migrate,
char *  old_name = NULL 
) [protected, virtual, inherited]

This method prepares everything for a one-to-one parameter migration. One to one here means that only ONE element of the parameter base is needed for the migration (the one with the same name as the target). Data is allocated for the target (in the type as provided in the target SGParamInfo), and a corresponding new TParameter instance is written to replacement. The to_migrate pointer points to the single needed TParameter instance needed for migration. If a name change happened, the old name may be specified by old_name. In addition, the m_delete_data flag of to_migrate is set to true. So if you want to migrate data, the only thing to do after this call is converting the data in the m_parameter fields. If unsure how to use - have a look into an example for this. (base_migration_type_conversion.cpp for example)

Parameters:
param_baseset of TParameter instances to use for migration
targetparameter info for the resulting TParameter
replacement(used as output) here the TParameter instance which is returned by migration is created into
to_migratethe only source that is used for migration
old_namewith this parameter, a name change may be specified

Definition at line 818 of file SGObject.cpp.

void print_modsel_params ( ) [inherited]

prints all parameter registered for model selection and their type

Definition at line 1036 of file SGObject.cpp.

void print_serializable ( const char *  prefix = "") [virtual, inherited]

prints registered parameters out

Parameters:
prefixprefix for members

Definition at line 240 of file SGObject.cpp.

char * read_whole_file ( char *  fname,
size_t &  len 
) [static, inherited]

read whole file in memory

Parameters:
fname- file name
len- length of file (returned by reference)
Returns:
buffer to read file - needs to be freed with SG_FREE

Definition at line 226 of file File.cpp.

bool save_serializable ( CSerializableFile file,
const char *  prefix = "",
int32_t  param_version = Version::get_version_parameter() 
) [virtual, inherited]

Save this object to file.

Parameters:
filewhere to save the object; will be closed during returning if PREFIX is an empty string.
prefixprefix for members
param_version(optional) a parameter version different to (this is mainly for testing, better do not use)
Returns:
TRUE if done, otherwise FALSE

Definition at line 246 of file SGObject.cpp.

void save_serializable_post ( ) throw (ShogunException) [protected, virtual, inherited]

Can (optionally) be overridden to post-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_POST is called.

Exceptions:
ShogunExceptionWill be thrown if an error occurres.

Reimplemented in CKernel.

Definition at line 999 of file SGObject.cpp.

void save_serializable_pre ( ) throw (ShogunException) [protected, virtual, inherited]

Can (optionally) be overridden to pre-initialize some member variables which are not PARAMETER::ADD'ed. Make sure that at first the overridden method BASE_CLASS::SAVE_SERIALIZABLE_PRE is called.

Exceptions:
ShogunExceptionWill be thrown if an error occurres.

Reimplemented in CKernel, CDynamicArray< T >, CDynamicArray< float64_t >, CDynamicArray< float32_t >, CDynamicArray< int32_t >, CDynamicArray< char >, CDynamicArray< bool >, and CDynamicObjectArray.

Definition at line 994 of file SGObject.cpp.

void set_generic< complex128_t > ( ) [inherited]

set generic type to T

Definition at line 41 of file SGObject.cpp.

void set_global_io ( SGIO io) [inherited]

set the io object

Parameters:
ioio object to use

Definition at line 167 of file SGObject.cpp.

void set_global_parallel ( Parallel parallel) [inherited]

set the parallel object

Parameters:
parallelparallel object to use

Definition at line 180 of file SGObject.cpp.

void set_global_version ( Version version) [inherited]

set the version object

Parameters:
versionversion object to use

Definition at line 215 of file SGObject.cpp.

virtual void set_matrix ( const uint8_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 294 of file LibSVMFile.h.

virtual void set_matrix ( const int8_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 296 of file LibSVMFile.h.

virtual void set_matrix ( const char *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 298 of file LibSVMFile.h.

virtual void set_matrix ( const int32_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 300 of file LibSVMFile.h.

virtual void set_matrix ( const uint32_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 302 of file LibSVMFile.h.

virtual void set_matrix ( const int64_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 304 of file LibSVMFile.h.

virtual void set_matrix ( const uint64_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 306 of file LibSVMFile.h.

virtual void set_matrix ( const float32_t matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 308 of file LibSVMFile.h.

virtual void set_matrix ( const float64_t matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 310 of file LibSVMFile.h.

virtual void set_matrix ( const floatmax_t matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 312 of file LibSVMFile.h.

virtual void set_matrix ( const int16_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 314 of file LibSVMFile.h.

virtual void set_matrix ( const uint16_t *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

Definition at line 316 of file LibSVMFile.h.

void set_matrix ( const bool *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual, inherited]

Definition at line 118 of file File.cpp.

virtual void set_sparse_matrix ( const SGSparseVector< bool > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< uint8_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< int8_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< char > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< int32_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< uint32_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< int64_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< uint64_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< int16_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< uint16_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< float32_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< float64_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< floatmax_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec 
) [virtual]

Implements CFile.

virtual void set_sparse_matrix ( const SGSparseVector< bool > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< uint8_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< int8_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< char > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< int32_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< uint32_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< int64_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< uint64_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< int16_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< uint16_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< float32_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< float64_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_matrix ( const SGSparseVector< floatmax_t > *  matrix,
int32_t  num_feat,
int32_t  num_vec,
const float64_t labels 
) [virtual]
virtual void set_sparse_vector ( const SGSparseVectorEntry< bool > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< uint8_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< int8_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< char > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< int32_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< uint32_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< int64_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< uint64_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< int16_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< uint16_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< float32_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< float64_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_sparse_vector ( const SGSparseVectorEntry< floatmax_t > *  entries,
int32_t  num_feat 
) [virtual, inherited]
virtual void set_string_list ( const SGString< uint8_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 412 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< int8_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 414 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< char > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 416 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< int32_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 418 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< uint32_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 420 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< int16_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 422 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< uint16_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 424 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< int64_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 426 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< uint64_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 428 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< float32_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 430 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< float64_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 432 of file LibSVMFile.h.

virtual void set_string_list ( const SGString< floatmax_t > *  strings,
int32_t  num_str 
) [virtual]

Implements CFile.

Definition at line 434 of file LibSVMFile.h.

void set_string_list ( const SGString< bool > *  strings,
int32_t  num_str 
) [virtual, inherited]

Definition at line 155 of file File.cpp.

void set_variable_name ( const char *  name) [inherited]

set the path to the variable to be accessed

only supported by some file interfaces like CHDF5File

Parameters:
namevariable path & name

Definition at line 179 of file File.cpp.

virtual void set_vector ( const int8_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 273 of file LibSVMFile.h.

virtual void set_vector ( const uint8_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 274 of file LibSVMFile.h.

virtual void set_vector ( const char *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 275 of file LibSVMFile.h.

virtual void set_vector ( const int32_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 276 of file LibSVMFile.h.

virtual void set_vector ( const uint32_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 277 of file LibSVMFile.h.

virtual void set_vector ( const float32_t vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 278 of file LibSVMFile.h.

virtual void set_vector ( const float64_t vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 279 of file LibSVMFile.h.

virtual void set_vector ( const floatmax_t vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 280 of file LibSVMFile.h.

virtual void set_vector ( const int16_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 281 of file LibSVMFile.h.

virtual void set_vector ( const uint16_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 282 of file LibSVMFile.h.

virtual void set_vector ( const int64_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 283 of file LibSVMFile.h.

virtual void set_vector ( const uint64_t *  vector,
int32_t  len 
) [virtual]

Implements CFile.

Definition at line 284 of file LibSVMFile.h.

void set_vector ( const bool *  vector,
int32_t  len 
) [virtual, inherited]

Definition at line 87 of file File.cpp.

virtual CSGObject* shallow_copy ( ) const [virtual, inherited]

A shallow copy. All the SGObject instance variables will be simply assigned and SG_REF-ed.

Reimplemented in CGaussianKernel.

Definition at line 117 of file SGObject.h.

void unset_generic ( ) [inherited]

unset generic type

this has to be called in classes specializing a template class

Definition at line 235 of file SGObject.cpp.

bool update_parameter_hash ( ) [virtual, inherited]

Updates the hash of current parameter combination.

Returns:
bool if parameter combination has changed since last update.

Definition at line 187 of file SGObject.cpp.


Member Data Documentation

FILE* file [protected, inherited]

file object

Definition at line 501 of file File.h.

char* filename [protected, inherited]

name of the handled file

Definition at line 505 of file File.h.

SGIO* io [inherited]

io

Definition at line 473 of file SGObject.h.

parameters wrt which we can compute gradients

Definition at line 488 of file SGObject.h.

uint32_t m_hash [inherited]

Hash of parameter values

Definition at line 494 of file SGObject.h.

model selection parameters

Definition at line 485 of file SGObject.h.

map for different parameter versions

Definition at line 491 of file SGObject.h.

Parameter* m_parameters [inherited]

parameters

Definition at line 482 of file SGObject.h.

Parallel* parallel [inherited]

parallel

Definition at line 476 of file SGObject.h.

char task [protected, inherited]

task

Definition at line 503 of file File.h.

char* variable_name [protected, inherited]

variable name / path to variable

Definition at line 507 of file File.h.

Version* version [inherited]

version

Definition at line 479 of file SGObject.h.


The documentation for this class was generated from the following files:
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Defines

SHOGUN Machine Learning Toolbox - Documentation