ExodusII
6.05
|
#include <ctype.h>
#include <errno.h>
#include <stddef.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <sys/types.h>
#include "exodusII.h"
#include "exodusII_int.h"
Defines | |
#define | MAGIC_NUMBER_LEN 4 |
#define | EX_QSORT_CUTOFF 12 |
Functions | |
int | ex_check_file_type (const char *path, int *type) |
int | ex_set_max_name_length (int exoid, int length) |
void | ex_update_max_name_length (int exoid, int length) |
int | ex_put_names_internal (int exoid, int varid, size_t num_entity, char **names, ex_entity_type obj_type, const char *subtype, const char *routine) |
int | ex_put_name_internal (int exoid, int varid, size_t index, const char *name, ex_entity_type obj_type, const char *subtype, const char *routine) |
int | ex_get_names_internal (int exoid, int varid, size_t num_entity, char **names, ex_entity_type obj_type, const char *routine) |
int | ex_get_name_internal (int exoid, int varid, size_t index, char *name, int name_size, ex_entity_type obj_type, const char *routine) |
void | ex_trim_internal (char *name) |
char * | ex_catstr (const char *string, int num) |
char * | ex_catstr2 (const char *string1, int num1, const char *string2, int num2) |
char * | ex_name_of_object (ex_entity_type obj_type) |
ex_entity_type | ex_var_type_to_ex_entity_type (char var_type) |
char * | ex_dim_num_objects (ex_entity_type obj_type) |
char * | ex_dim_num_entries_in_object (ex_entity_type obj_type, int idx) |
char * | ex_name_var_of_object (ex_entity_type obj_type, int i, int j) |
char * | ex_name_of_map (ex_entity_type map_type, int map_index) |
int | ex_id_lkup (int exoid, ex_entity_type id_type, ex_entity_id num) |
struct obj_stats * | ex_get_stat_ptr (int exoid, struct obj_stats **obj_ptr) |
void | ex_rm_stat_ptr (int exoid, struct obj_stats **obj_ptr) |
struct list_item ** | ex_get_counter_list (ex_entity_type obj_type) |
int | ex_inc_file_item (int exoid, struct list_item **list_ptr) |
int | ex_get_file_item (int exoid, struct list_item **list_ptr) |
void | ex_rm_file_item (int exoid, struct list_item **list_ptr) |
int | ex_get_num_props (int exoid, ex_entity_type obj_type) |
int | ex_get_cpu_ws (void) |
static void | ex_swap (int v[], int i, int j) |
static void | ex_swap64 (int64_t v[], int64_t i, int64_t j) |
static int | ex_int_median3 (int v[], int iv[], int64_t left, int64_t right) |
static int64_t | ex_int_median3_64 (int64_t v[], int64_t iv[], int64_t left, int64_t right) |
static void | ex_int_iqsort (int v[], int iv[], int left, int right) |
static void | ex_int_iqsort64 (int64_t v[], int64_t iv[], int64_t left, int64_t right) |
static void | ex_int_iisort (int v[], int iv[], int N) |
static void | ex_int_iisort64 (int64_t v[], int64_t iv[], int64_t N) |
void | ex_iqsort (int v[], int iv[], int N) |
void | ex_iqsort64 (int64_t v[], int64_t iv[], int64_t N) |
int | ex_large_model (int exoid) |
int | ex_get_dimension (int exoid, const char *DIMENSION, const char *label, size_t *count, int *dimid, const char *routine) |
size_t | ex_header_size (int exoid) |
void | ex_compress_variable (int exoid, int varid, int type) |
void * | ex_safe_free (void *array) |
Variables | |
struct obj_stats * | exoII_eb = 0 |
struct obj_stats * | exoII_ed = 0 |
struct obj_stats * | exoII_fa = 0 |
struct obj_stats * | exoII_ns = 0 |
struct obj_stats * | exoII_es = 0 |
struct obj_stats * | exoII_fs = 0 |
struct obj_stats * | exoII_ss = 0 |
struct obj_stats * | exoII_els = 0 |
struct obj_stats * | exoII_em = 0 |
struct obj_stats * | exoII_edm = 0 |
struct obj_stats * | exoII_fam = 0 |
struct obj_stats * | exoII_nm = 0 |
static char | ret_string [10 *(MAX_VAR_NAME_LENGTH+1)] |
static char * | cur_string = &ret_string[0] |
static struct list_item * | ed_ctr_list = 0 |
static struct list_item * | fa_ctr_list = 0 |
static struct list_item * | eb_ctr_list = 0 |
static struct list_item * | ns_ctr_list = 0 |
static struct list_item * | es_ctr_list = 0 |
static struct list_item * | fs_ctr_list = 0 |
static struct list_item * | ss_ctr_list = 0 |
static struct list_item * | els_ctr_list = 0 |
static struct list_item * | nm_ctr_list = 0 |
static struct list_item * | edm_ctr_list = 0 |
static struct list_item * | fam_ctr_list = 0 |
static struct list_item * | em_ctr_list = 0 |
#define EX_QSORT_CUTOFF 12 |
The following 'indexed qsort' routine is modified from Sedgewicks algorithm It selects the pivot based on the median of the left, right, and center values to try to avoid degenerate cases ocurring when a single value is chosen. It performs a quicksort on intervals down to the EX_QSORT_CUTOFF size and then performs a final insertion sort on the almost sorted final array. Based on data in Sedgewick, the EX_QSORT_CUTOFF value should be between 5 and 20.
See Sedgewick for further details Define DEBUG_QSORT at the top of this file and recompile to compile in code that verifies that the array is sorted.
NOTE: The 'int' implementation below assumes that *both* the items being sorted and the *number* of items being sorted are both representable as 'int'.
#define MAGIC_NUMBER_LEN 4 |
char* ex_catstr | ( | const char * | string, |
int | num | ||
) |
ex_catstr - concatenate string/number (where number is converted to ASCII)
char* ex_catstr2 | ( | const char * | string1, |
int | num1, | ||
const char * | string2, | ||
int | num2 | ||
) |
ex_catstr2 - concatenate string1num1string2num2
int ex_check_file_type | ( | const char * | path, |
int * | type | ||
) |
void ex_compress_variable | ( | int | exoid, |
int | varid, | ||
int | type | ||
) |
char* ex_dim_num_entries_in_object | ( | ex_entity_type | obj_type, |
int | idx | ||
) |
char* ex_dim_num_objects | ( | ex_entity_type | obj_type | ) |
struct list_item** ex_get_counter_list | ( | ex_entity_type | obj_type | ) | [read] |
int ex_get_cpu_ws | ( | void | ) |
int ex_get_dimension | ( | int | exoid, |
const char * | DIMENSION, | ||
const char * | label, | ||
size_t * | count, | ||
int * | dimid, | ||
const char * | routine | ||
) |
int ex_get_file_item | ( | int | exoid, |
struct list_item ** | list_ptr | ||
) |
this routine accesses a structure to track and increment a counter for each open exodus file. it is designed to be used by the routines ex_put_elem_block(), and ex_put_set_param(), to get the number of element blocks, or a type of set, respectively, for an open exodus II file.
The list structure is used as follows:
ptr -----------> list item structure ------------------- exodus file id item value (int) ptr to next (NULL if last)
NOTE: since netCDF reuses its file ids, and a user may open and close any number of files in one application, items must be taken out of the linked lists in each of the above routines. these should be called after ncclose().
int ex_get_name_internal | ( | int | exoid, |
int | varid, | ||
size_t | index, | ||
char * | name, | ||
int | name_size, | ||
ex_entity_type | obj_type, | ||
const char * | routine | ||
) |
int ex_get_names_internal | ( | int | exoid, |
int | varid, | ||
size_t | num_entity, | ||
char ** | names, | ||
ex_entity_type | obj_type, | ||
const char * | routine | ||
) |
int ex_get_num_props | ( | int | exoid, |
ex_entity_type | obj_type | ||
) |
struct obj_stats* ex_get_stat_ptr | ( | int | exoid, |
struct obj_stats ** | obj_ptr | ||
) | [read] |
this routine returns a pointer to a structure containing the ids of element blocks, node sets, or side sets according to exoid; if there is not a structure that matches the exoid, one is created
size_t ex_header_size | ( | int | exoid | ) |
int ex_id_lkup | ( | int | exoid, |
ex_entity_type | id_type, | ||
ex_entity_id | num | ||
) |
int ex_inc_file_item | ( | int | exoid, |
struct list_item ** | list_ptr | ||
) |
this routine sets up a structure to track and increment a counter for each open exodus file. it is designed to be used by the routines ex_put_elem_block() and ex_put_set_param(), to keep track of the number of element blocks, and each type of set, respectively, for each open exodus II file.
The list structure is used as follows:
ptr -----------> list item structure ------------------- exodus file id item value (int) ptr to next (NULL if last)
NOTE: since netCDF reuses its file ids, and a user may open and close any number of files in one application, items must be taken out of the linked lists in each of the above routines. these should be called after ncclose().
static void ex_int_iisort | ( | int | v[], |
int | iv[], | ||
int | N | ||
) | [static] |
static void ex_int_iisort64 | ( | int64_t | v[], |
int64_t | iv[], | ||
int64_t | N | ||
) | [static] |
static void ex_int_iqsort | ( | int | v[], |
int | iv[], | ||
int | left, | ||
int | right | ||
) | [static] |
static void ex_int_iqsort64 | ( | int64_t | v[], |
int64_t | iv[], | ||
int64_t | left, | ||
int64_t | right | ||
) | [static] |
static int ex_int_median3 | ( | int | v[], |
int | iv[], | ||
int64_t | left, | ||
int64_t | right | ||
) | [static] |
static int64_t ex_int_median3_64 | ( | int64_t | v[], |
int64_t | iv[], | ||
int64_t | left, | ||
int64_t | right | ||
) | [static] |
void ex_iqsort | ( | int | v[], |
int | iv[], | ||
int | N | ||
) |
void ex_iqsort64 | ( | int64_t | v[], |
int64_t | iv[], | ||
int64_t | N | ||
) |
int ex_large_model | ( | int | exoid | ) |
Determine whether the new large model storage is being used in this file, or old method. Basically, the difference is whether the coordinates and nodal variables are stored in a blob (xyz components together) or as a variable per component per nodal_variable.
char* ex_name_of_map | ( | ex_entity_type | map_type, |
int | map_index | ||
) |
char* ex_name_of_object | ( | ex_entity_type | obj_type | ) |
char* ex_name_var_of_object | ( | ex_entity_type | obj_type, |
int | i, | ||
int | j | ||
) |
int ex_put_name_internal | ( | int | exoid, |
int | varid, | ||
size_t | index, | ||
const char * | name, | ||
ex_entity_type | obj_type, | ||
const char * | subtype, | ||
const char * | routine | ||
) |
int ex_put_names_internal | ( | int | exoid, |
int | varid, | ||
size_t | num_entity, | ||
char ** | names, | ||
ex_entity_type | obj_type, | ||
const char * | subtype, | ||
const char * | routine | ||
) |
void ex_rm_file_item | ( | int | exoid, |
struct list_item ** | list_ptr | ||
) |
this routine removes a structure to track and increment a counter for each open exodus file.
The list structure is used as follows:
ptr -----------> list item structure ------------------- exodus file id item value (int) ptr to next (NULL if last)
NOTE: since netCDF reuses its file ids, and a user may open and close any number of files in one application, items must be taken out of the linked lists in each of the above routines. these should be called after ncclose().
void ex_rm_stat_ptr | ( | int | exoid, |
struct obj_stats ** | obj_ptr | ||
) |
this routine removes a pointer to a structure containing the ids of element blocks, node sets, or side sets according to exoid; this is necessary to clean up because netCDF reuses file ids; should be called from ex_close
void* ex_safe_free | ( | void * | array | ) |
int ex_set_max_name_length | ( | int | exoid, |
int | length | ||
) |
Note that the max name length setting is global at this time; not specific to a particular database; however, the exoid option is passed to give flexibility in the future to implement this on a database-by-database basis.
static void ex_swap | ( | int | v[], |
int | i, | ||
int | j | ||
) | [static] |
static void ex_swap64 | ( | int64_t | v[], |
int64_t | i, | ||
int64_t | j | ||
) | [static] |
void ex_trim_internal | ( | char * | name | ) |
void ex_update_max_name_length | ( | int | exoid, |
int | length | ||
) |
ex_entity_type ex_var_type_to_ex_entity_type | ( | char | var_type | ) |
char* cur_string = &ret_string[0] [static] |
struct list_item* eb_ctr_list = 0 [static] |
struct list_item* ed_ctr_list = 0 [static] |
struct list_item* edm_ctr_list = 0 [static] |
struct list_item* els_ctr_list = 0 [static] |
struct list_item* em_ctr_list = 0 [static] |
struct list_item* es_ctr_list = 0 [static] |
struct list_item* fa_ctr_list = 0 [static] |
struct list_item* fam_ctr_list = 0 [static] |
struct list_item* fs_ctr_list = 0 [static] |
struct list_item* nm_ctr_list = 0 [static] |
struct list_item* ns_ctr_list = 0 [static] |
char ret_string[10 *(MAX_VAR_NAME_LENGTH+1)] [static] |
struct list_item* ss_ctr_list = 0 [static] |